C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: triggering receptor expressed on myeloid cells 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244709 TREM1-001 ENSG00000124731 9606 - 6:41275204-41286719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244709
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244709 0.653±0.00 0.124±0.09 0.178±0.10 0.092±0.00 0.048±0.00 0.227±0.07 0.135±0.04 3.143±1.46 0.060±0.00 4.078±4.67 2.105±0.71 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0001 VISTA 6:41112821-41713777
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002374 IEA cytokine secretion involved in immune response
GO:0004872 TAS receptor activity
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0006959 TAS humoral immune response
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0016477 IEA cell migration
GO:0030593 IEA neutrophil chemotaxis
GO:0035556 TAS intracellular signal transduction
GO:0042107 IEA cytokine metabolic process
GO:0045087 TAS innate immune response
GO:0050755 IEA chemokine metabolic process
GO:0050900 TAS leukocyte migration
GO:0070945 IEA neutrophil mediated killing of gram-negative bacterium
GO:0072672 IEA neutrophil extravasation
GO:0097110 IPI scaffold protein binding

Homologs

No Homologs available.

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