C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: galanin receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000249041 GALR3-001 ENSG00000128310 9606 + 22:37823382-37825495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyTestisENST00000249041
Transcript ID Brain Kidney Testis
ENST00000249041 0.066±0.00 0.055±0.00 0.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004966 IDA galanin receptor activity
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007193 IEA adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007194 IEA negative regulation of adenylate cyclase activity
GO:0007218 IEA neuropeptide signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007611 TAS learning or memory
GO:0007631 TAS feeding behavior
GO:0016021 IEA integral component of membrane
GO:0017046 IDA peptide hormone binding
GO:0030818 IEA negative regulation of cAMP biosynthetic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058004 Gcat-202 protein_coding Mus_musculus 0 1221
ENSMUST00000171999 Gcat-203 protein_coding Mus_musculus 0 435
ENSDART00000066104 si:ch73-52e11.1-201 protein_coding Danio_rerio 0.0000000007 69
ENSDART00000154514 si:ch73-52e11.1-001 protein_coding Danio_rerio 0.0000000007 69

Loading