C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000250360 SIGLEC9-001 ENSG00000129450 9606 + 19:51124908-51130310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000250360
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000250360 1.832±0.00 1.409±0.00 1.298±1.05 0.247±0.20 0.198±0.14 0.412±0.23 1.694±0.15 1.230±0.96 1.560±1.12 0.092±0.00 0.745±0.22 2.839±0.81 0.935±0.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005887 NAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007166 NAS cell surface receptor signaling pathway
GO:0030246 NAS carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121494 Siglec5-004 protein_coding Mus_musculus 1e-24 119
ENSMUST00000122423 Siglec5-003 protein_coding Mus_musculus 1e-24 119
ENSMUST00000012798 Siglec5-001 protein_coding Mus_musculus 1e-24 119
ENSMUST00000145867 Siglec5-002 retained_intron Mus_musculus 1e-24 119

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