C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252934 ATXN10-001 ENSG00000130638 9606 + 22:45671799-45845307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252934
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252934 2.378±0.00 3.783±0.00 3.096±0.00 11.163±2.07 2.742±1.05 3.863±1.06 2.970±0.81 5.157±0.79 4.508±1.55 5.836±0.85 3.002±0.03 13.554±5.76 13.167±3.77 8.997±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054E CIL_00054E_0001 CGP 22:45502238-45845307
CIL_0008KW CIL_0008KW_0001 VISTA 22:45545035-46146420

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0007399 IMP nervous system development
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0030425 IDA dendrite
GO:0031175 IDA neuron projection development
GO:0042802 IEA identical protein binding
GO:0043025 IDA neuronal cell body
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

No Homologs available.

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