C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amine oxidase, copper containing 2 (retina-specific)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253799 AOC2-001 ENSG00000131480 9606 + 17:42844600-42850707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000253799
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000253799 0.363±0.00 0.227±0.00 0.799±0.00 1.869±1.75 0.254±0.00 0.060±0.00 0.228±0.00 0.482±0.34 0.273±0.00 0.760±0.64 0.168±0.00 1.435±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MA CIL_0004MA_0001 CGP 17:42824385-42850707
CIL_0004MM CIL_0004MM_0001 CGP 17:42844600-42858130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006584 IEA catecholamine metabolic process
GO:0007601 TAS visual perception
GO:0008131 IEA primary amine oxidase activity
GO:0009055 TAS electron carrier activity
GO:0009308 IEA amine metabolic process
GO:0048038 IEA quinone binding
GO:0052593 IEA tryptamine:oxygen oxidoreductase (deaminating) activity
GO:0052594 IEA aminoacetone:oxygen oxidoreductase(deaminating) activity
GO:0052595 IEA aliphatic-amine oxidase activity
GO:0052596 IEA phenethylamine:oxygen oxidoreductase (deaminating) activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041095 Aoc2-001 protein_coding Mus_musculus 0 2106
ENSMUST00000107264 Aoc2-002 protein_coding Mus_musculus 0 1633
ENSMUST00000117946 Gm11618-001 unprocessed_pseudogene Mus_musculus 0 261

Loading