C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amine oxidase, copper containing 2 (retina-specific)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107264 Aoc2-002 ENSMUSG00000078651 10090 + 11:101325087-101329494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLiverMuscleOvaryPlacentaENSMUST00000107264
Transcript ID Adipose Adrenal Breast Heart Liver Muscle Ovary Placenta
ENSMUST00000107264 0.282±0.00 0.712±0.06 0.476±0.00 0.273±0.00 0.231±0.00 0.112±0.02 0.758±0.00 0.386±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MA CIL_0004MA_0002 CGP 11:101316213-101329702
CIL_0004MM CIL_0004MM_0002 CGP 11:101325063-101341938

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0005575 ND cellular_component
GO:0008131 IEA primary amine oxidase activity
GO:0009308 IEA amine metabolic process
GO:0048038 IEA quinone binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253799 AOC2-001 protein_coding Homo_sapiens 0 1633
ENST00000308423 AOC3-001 protein_coding Homo_sapiens 0 470
ENST00000452774 AOC2-002 protein_coding Homo_sapiens 0 2039
ENST00000562301 AOC4P-002 processed_transcript Homo_sapiens 0 315
ENST00000566825 AOC4P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 477
ENST00000569586 AOC4P-003 processed_transcript Homo_sapiens 0 364
ENST00000585538 AOC4P-006 processed_transcript Homo_sapiens 0 477
ENST00000613571 AOC3-201 protein_coding Homo_sapiens 0 470

Loading