C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tensin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254051 TNS4-001 ENSG00000131746 9606 - 17:40475828-40501597 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000254051
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000254051 0.687±0.00 0.052±0.00 0.010±0.00 5.745±0.00 0.326±0.07 0.043±0.00 0.596±0.00 0.325±0.00 1.811±0.00 15.636±16.73 15.809±6.64 0.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005R3 CIL_0005R3_0001 CGP 17:40443461-40501597
CIL_0005QX CIL_0005QX_0001 CGP 17:40475828-40565472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IDA focal adhesion
GO:0006915 IEA apoptotic process
GO:0008104 IDA protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017751 Tns4-001 protein_coding Mus_musculus 0 1312
ENSMUST00000107465 Tns4-004 processed_transcript Mus_musculus 0 628
ENSMUST00000153351 Tns4-003 retained_intron Mus_musculus 0 599

Loading