C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254821 ZRANB2-002 ENSG00000132485 9606 - 1:71063337-71081011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254821
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254821 4.555±0.00 2.024±0.00 4.305±0.00 4.042±2.03 7.336±0.00 7.352±0.00 4.897±0.00 2.242±0.00 4.201±0.00 3.672±3.26 7.992±2.66 3.395±0.32 3.977±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003723 TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106057 Zranb2-002 protein_coding Mus_musculus 0 1681
ENSMUST00000106063 Zranb2-202 protein_coding Mus_musculus 0 1319
ENSMUST00000106058 Zranb2-001 protein_coding Mus_musculus 0 1140
ENSMUST00000029831 Zranb2-201 protein_coding Mus_musculus 0 998
ENSMUST00000184802 Zranb2-003 nonsense_mediated_decay Mus_musculus 0 998
ENSMUST00000152882 Zranb2-004 retained_intron Mus_musculus 0 839

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