C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vertebrae development associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256362 VRTN-001 ENSG00000133980 9606 + 14:74348413-74360008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleOvaryTestisENST00000256362
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000256362 0.025±0.00 0.073±0.00 0.010±0.00 0.045±0.00 0.006±0.00 0.057±0.00 0.006±0.00 0.006±0.00 0.022±0.01 0.553±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000231 CIL_000231_0001 CGP 14:74285423-74360008
CIL_0004KJ CIL_0004KJ_0002 CGP 14:74303069-74426102

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004803 IEA transposase activity
GO:0006313 IEA transposition, DNA-mediated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166772 Vrtn-202 protein_coding Mus_musculus 0 1393
ENSMUST00000095551 Vrtn-201 protein_coding Mus_musculus 0 1315
ENSMUST00000167227 Vrtn-203 protein_coding Mus_musculus 0 1314

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