C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deltex 1, E3 ubiquitin ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257600 DTX1-001 ENSG00000135144 9606 + 12:113057690-113098028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000257600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000257600 12.553±0.00 14.070±0.00 0.641±0.00 6.304±5.32 13.277±13.20 0.823±0.00 0.324±0.00 1.573±0.80 6.111±5.68 0.358±0.27 1.924±1.51 1.146±0.77 3.919±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UQ CIL_0005UQ_0002 CGP 12:113056709-113136239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 TAS transcription coactivator activity
GO:0005112 IDA Notch binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006351 NAS transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007219 TAS Notch signaling pathway
GO:0008270 IEA zinc ion binding
GO:0008593 IGI regulation of Notch signaling pathway
GO:0010001 IEA glial cell differentiation
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017124 IEA SH3 domain binding
GO:0031625 IPI ubiquitin protein ligase binding
GO:0045581 IEA negative regulation of T cell differentiation
GO:0045665 IGI negative regulation of neuron differentiation
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031607 Dtx1-001 protein_coding Mus_musculus 0 2361
ENSMUST00000145174 Dtx1-002 retained_intron Mus_musculus 0 1914
ENSMUST00000144889 Dtx1-004 retained_intron Mus_musculus 0 754
ENSMUST00000124079 Dtx1-003 processed_transcript Mus_musculus 0 592
ENSMUST00000151562 Dtx1-005 retained_intron Mus_musculus 0 534
ENSMUST00000045521 Dtx4-201 protein_coding Mus_musculus 0 231
ENSMUST00000142041 Dtx2-006 retained_intron Mus_musculus 0 206
ENSMUST00000005072 Dtx2-005 protein_coding Mus_musculus 0 206
ENSMUST00000125827 Dtx2-004 nonsense_mediated_decay Mus_musculus 0 206
ENSMUST00000111144 Dtx2-003 protein_coding Mus_musculus 0 206
ENSMUST00000111145 Dtx2-002 protein_coding Mus_musculus 0 206
ENSMUST00000111142 Dtx2-001 protein_coding Mus_musculus 0 206

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