C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protease-associated domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258083 PRADC1-001 ENSG00000135617 9606 - 2:73228006-73233228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258083 9.107±0.00 13.437±0.00 0.210±0.00 4.876±3.00 11.415±10.10 6.225±5.31 19.670±17.41 13.670±9.39 11.917±11.21 5.179±0.00 8.381±2.70 9.345±5.20 13.422±0.77 23.639±3.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EK CIL_0003EK_0001 CGP 2:73214222-73233238
CIL_0003EL CIL_0003EL_0001 CGP 2:73228006-73253021

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IDA extracellular region
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032080 Pradc1-001 protein_coding Mus_musculus 0 870
ENSMUST00000126805 Pradc1-003 processed_transcript Mus_musculus 0 760
ENSMUST00000146086 Pradc1-007 retained_intron Mus_musculus 0 628
ENSMUST00000113770 Pradc1-002 protein_coding Mus_musculus 0 412
ENSMUST00000154918 Pradc1-005 processed_transcript Mus_musculus 0 370
ENSMUST00000139875 Pradc1-004 processed_transcript Mus_musculus 0 303
ENSMUST00000122907 Pradc1-006 processed_transcript Mus_musculus 9e-39 165

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