C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135617-ENSG00000135624 CGP 9606 2:73228006-73253021
GeneTranscriptPositionBiotype
ENSG00000135617 (PRADC1)
protease-associated domain containing 1 		ENST00000258083 (PRADC1-001) 73228006-73233228 protein_coding
ENST00000470391 (PRADC1-004) 73229799-73233229 retained_intron
ENST00000480093 (PRADC1-002) 73228331-73233238 processed_transcript
ENSG00000135624 (CCT7)
chaperonin containing TCP1, subunit 7 (eta) 		ENST00000258091 (CCT7-001) 73234238-73253004 protein_coding
ENST00000398422 (CCT7-010) 73234308-73253004 protein_coding
ENST00000399032 (CCT7-003) 73234308-73244029 protein_coding
ENST00000409924 (CCT7-015) 73234309-73247789 nonsense_mediated_decay
ENST00000461290 (CCT7-011) 73234269-73244511 retained_intron
ENST00000464397 (CCT7-009) 73234307-73240147 retained_intron
ENST00000469844 (CCT7-004) 73233429-73244630 processed_transcript
ENST00000471927 (CCT7-007) 73233420-73243108 processed_transcript
ENST00000473197 (CCT7-006) 73233445-73240548 processed_transcript
ENST00000473786 (CCT7-013) 73234336-73249844 processed_transcript
ENST00000480489 (CCT7-012) 73234309-73243193 retained_intron
ENST00000482064 (CCT7-008) 73239101-73243130 processed_transcript
ENST00000488856 (CCT7-016) 73243846-73249061 retained_intron
ENST00000492253 (CCT7-005) 73233459-73243082 processed_transcript
ENST00000539919 (CCT7-201) 73234236-73253021 protein_coding
ENST00000540468 (CCT7-202) 73234236-73253021 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003EL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030008-ENSMUSG00000030007 CGP 10090 6:85446810-85468477
GeneTranscriptPositionBiotype
ENSMUSG00000030007 (Cct7)
chaperonin containing Tcp1, subunit 7 (eta) 		ENSMUST00000032078 (Cct7-201) 85451505-85468477 protein_coding
ENSMUSG00000030008 (Pradc1)
protease-associated domain containing 1 		ENSMUST00000032080 (Pradc1-001) 85446810-85451283 protein_coding
ENSMUST00000113770 (Pradc1-002) 85447035-85451248 protein_coding
ENSMUST00000122907 (Pradc1-006) 85447680-85451213 processed_transcript
ENSMUST00000126805 (Pradc1-003) 85446938-85451970 processed_transcript
ENSMUST00000139875 (Pradc1-004) 85447208-85451945 processed_transcript
ENSMUST00000146086 (Pradc1-007) 85447034-85451201 retained_intron
ENSMUST00000154918 (Pradc1-005) 85447533-85451224 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EL_0001ENSG00000135617ENST00000258083ENST00000470391ENST00000480093ENSG00000135624ENST00000258091ENST00000398422ENST00000399032ENST00000409924ENST00000461290ENST00000464397ENST00000469844ENST00000471927ENST00000473197ENST00000473786ENST00000480489ENST00000482064ENST00000488856ENST00000492253ENST00000539919ENST00000540468CIL_0003EL_0002ENSMUSG00000030007ENSMUST00000032078ENSMUSG00000030008ENSMUST00000032080ENSMUST00000113770ENSMUST00000122907ENSMUST00000126805ENSMUST00000139875ENSMUST00000146086ENSMUST00000154918
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EL_0001ENSG00000135617ENST00000258083ENST00000470391ENST00000480093ENSG00000135624ENST00000258091ENST00000398422ENST00000409924ENST00000461290ENST00000469844ENST00000473786ENST00000540468CIL_0003EL_0002ENSMUSG00000030007ENSMUST00000032078ENSMUSG00000030008ENSMUST00000032080
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135617 ENST00000258083 9.107±0.00 13.437±0.00 0.210±0.00 4.876±3.00 11.415±10.10 6.225±5.31 19.670±17.41 13.670±9.39 11.917±11.21 5.179±0.00 8.381±2.70 9.345±5.20 13.422±0.77 23.639±3.96
ENST00000470391 N/A N/A N/A N/A 1.794±0.00 1.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480093 N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A 1.533±0.00 0.445±0.00 N/A 1.983±0.00 N/A N/A
ENSG00000135624 ENST00000258091 58.304±0.00 54.380±0.00 1.659±0.00 41.530±13.61 30.108±13.85 46.922±33.33 34.563±27.01 38.715±24.76 14.803±4.32 35.204±27.98 44.528±28.47 71.186±28.16 64.832±39.93 64.958±16.33
ENST00000398422 19.911±0.00 40.981±0.00 N/A 20.427±0.00 20.805±0.00 29.771±0.00 N/A 30.302±0.00 N/A N/A N/A 81.226±68.88 64.946±0.00 101.303±42.50
ENST00000399032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409924 N/A N/A N/A N/A N/A N/A 6.989±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000461290 N/A N/A 2.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 222.466±0.00 99.218±0.00 224.430±0.00
ENST00000471927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473786 N/A N/A 2.981±0.00 12.512±0.00 N/A 11.984±0.00 7.941±0.00 N/A 17.378±0.00 N/A N/A 16.164±0.00 N/A N/A
ENST00000480489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540468 N/A 21.803±0.00 N/A N/A 11.815±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030007 ENSMUST00000032078 50.966±12.23 42.687±3.12 36.967±0.00 111.260±20.61 43.345±3.52 44.969±2.37 40.282±1.07 50.782±3.17 72.966±45.33 40.931±9.57 42.675±1.41 95.328±37.74 140.505±130.99 243.309±27.69
ENSMUSG00000030008 ENSMUST00000032080 N/A 14.629±1.76 N/A N/A N/A N/A N/A N/A 7.980±0.00 11.238±0.33 N/A N/A N/A N/A
ENSMUST00000113770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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