C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258399 USP37-001 ENSG00000135913 9606 - 2:218450251-218568361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258399
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258399 0.885±0.00 1.128±0.00 0.898±0.05 0.627±0.16 2.961±0.00 0.647±0.09 0.822±0.30 2.032±0.00 1.331±0.52 0.725±0.00 1.873±0.72 0.590±0.00 1.487±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000650 CIL_000650_0001 CGP 2:218398256-218453295
CIL_000651 CIL_000651_0001 CGP 2:218419092-218568361
CIL_00064Y CIL_00064Y_0001 CGP 2:218450251-218597080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IDA G1/S transition of mitotic cell cycle
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007067 IEA mitotic nuclear division
GO:0016579 IDA protein deubiquitination
GO:0019901 IPI protein kinase binding
GO:0035871 IDA protein K11-linked deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0071108 IDA protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189257 Usp37-001 protein_coding Mus_musculus 0 3742
ENSMUST00000044260 Usp37-002 protein_coding Mus_musculus 0 2231
ENSMUST00000191058 Usp37-003 retained_intron Mus_musculus 0 1821
ENSMUST00000188012 Usp37-004 processed_transcript Mus_musculus 0 1751

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