C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258739 KDELR2-001 ENSG00000136240 9606 - 7:6461081-6484242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258739 56.530±0.00 53.246±0.00 10.017±0.00 9.016±3.79 38.556±10.55 39.993±5.54 12.000±6.78 56.142±11.23 54.152±36.29 36.505±15.74 10.652±7.29 54.176±15.91 93.314±8.39 48.505±13.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027I CIL_00027I_0002 CGP 7:6409126-6484242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005046 TAS KDEL sequence binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 TAS Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0006621 IEA protein retention in ER lumen
GO:0006886 TAS intracellular protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0046923 IEA ER retention sequence binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110731 Kdelr2-201 protein_coding Mus_musculus 0 1153
ENSMUST00000002855 Kdelr1-001 protein_coding Mus_musculus 0 285
ENSMUST00000107718 Kdelr1-004 protein_coding Mus_musculus 0 261
ENSMUST00000133022 Kdelr1-005 processed_transcript Mus_musculus 0 233
ENSMUST00000107719 Kdelr1-002 protein_coding Mus_musculus 8e-28 130

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