C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ferredoxin-fold anticodon binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260257 FDXACB1-001 ENSG00000255561 9606 - 11:111874056-111879180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungPlacentaTestisENST00000260257
Transcript ID Adrenal Colon Lung Placenta Testis
ENST00000260257 3.767±0.00 1.171±0.00 2.031±0.00 1.055±0.00 3.929±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000287 IEA magnesium ion binding
GO:0004826 IEA phenylalanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0006432 IEA phenylalanyl-tRNA aminoacylation
GO:0008033 IEA tRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042391 Fdxacb1-001 protein_coding Mus_musculus 0 1498
ENSMUST00000176145 Fdxacb1-005 nonsense_mediated_decay Mus_musculus 0 628
ENSMUST00000176335 Fdxacb1-003 protein_coding Mus_musculus 0 394
ENSMUST00000176619 Fdxacb1-002 retained_intron Mus_musculus 0 390
ENSMUST00000176160 1110032A03Rik-008 processed_transcript Mus_musculus 3e-37 161

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