C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260283 ARHGAP20-001 ENSG00000137727 9606 - 11:110577042-110712728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENST00000260283
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000260283 1.101±0.00 0.422±0.00 0.444±0.01 1.385±1.23 0.402±0.07 2.004±0.00 0.465±0.30 0.359±0.09 0.295±0.00 0.763±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C3 CIL_0002C3_0002 CGP 11:110429883-110713189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065496 Arhgap20-002 protein_coding Mus_musculus 0 3085
ENSMUST00000130405 Arhgap20-001 protein_coding Mus_musculus 0 2957
ENSMUST00000126567 Arhgap20-006 processed_transcript Mus_musculus 0 671
ENSMUST00000146509 Arhgap20-004 retained_intron Mus_musculus 0 603

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