C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfide quinone reductase-like (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260324 SQRDL-001 ENSG00000137767 9606 + 15:45634740-45691294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260324
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260324 38.347±0.00 24.826±0.00 19.295±0.00 26.492±7.00 4.114±0.00 16.578±9.15 19.927±0.00 31.975±0.00 50.832±0.00 21.887±12.46 7.216±4.43 11.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NC CIL_0004NC_0001 CGP 15:45587123-45676314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0000098 TAS sulfur amino acid catabolic process
GO:0005743 TAS mitochondrial inner membrane
GO:0016491 IEA oxidoreductase activity
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070221 IDA sulfide oxidation, using sulfide:quinone oxidoreductase
GO:0070224 IDA sulfide:quinone oxidoreductase activity
GO:0070813 IDA hydrogen sulfide metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005953 Sqrdl-001 protein_coding Mus_musculus 0 1328
ENSMUST00000110506 Sqrdl-002 protein_coding Mus_musculus 0 1312
ENSMUST00000176999 Sqrdl-006 retained_intron Mus_musculus 0 749
ENSMUST00000126403 Sqrdl-008 nonsense_mediated_decay Mus_musculus 0 743

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