C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysyl oxidase-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260702 LOXL4-001 ENSG00000138131 9606 - 10:98247690-98268250 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260702 2.852±0.00 1.390±0.00 0.228±0.00 0.306±0.26 3.106±2.90 3.551±0.00 0.117±0.00 1.375±1.24 0.565±0.00 2.029±1.32 3.820±0.00 1.885±1.71 4.597±0.56 3.992±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054Z CIL_00054Z_0001 CGP 10:98134624-98268250
CIL_00054Y CIL_00054Y_0001 CGP 10:98247690-98415184

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004720 IEA protein-lysine 6-oxidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005507 IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0043235 IDA receptor complex
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026190 Loxl4-001 protein_coding Mus_musculus 0 2603
ENSMUST00000164786 Loxl4-004 protein_coding Mus_musculus 0 2588
ENSMUST00000171432 Loxl4-201 protein_coding Mus_musculus 0 2414
ENSMUST00000166128 Loxl4-002 protein_coding Mus_musculus 0 385

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