C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionyl aminopeptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261220 METAP2-002 ENSG00000111142 9606 + 12:95474150-95514342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLungOvaryPlacentaTestisENST00000261220
Transcript ID Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000261220 7.250±0.00 9.830±0.00 1.938±0.00 4.056±0.00 23.601±0.00 15.302±0.00 29.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y1 CIL_0000Y1_0002 CGP 12:95217746-95515839
CIL_0000Y2 CIL_0000Y2_0002 CGP 12:95473520-95551490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004177 IDA:IEA aminopeptidase activity
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006508 IEA proteolysis
GO:0007603 TAS phototransduction, visible light
GO:0008235 IDA:IEA metalloexopeptidase activity
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0016485 IDA protein processing
GO:0018206 IDA peptidyl-methionine modification
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0031365 IDA N-terminal protein amino acid modification
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0070006 IEA metalloaminopeptidase activity
GO:0070084 IEA protein initiator methionine removal

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047910 Metap2-001 protein_coding Mus_musculus 0 1934
ENSMUST00000180840 Metap2-002 protein_coding Mus_musculus 0 1932
ENSMUST00000181217 Metap2-006 protein_coding Mus_musculus 0 1923
ENSMUST00000181091 Metap2-007 protein_coding Mus_musculus 0 1792
ENSMUST00000117244 Gm12057-001 processed_pseudogene Mus_musculus 0 1194
ENSMUST00000181894 Metap2-015 retained_intron Mus_musculus 0 1101
ENSMUST00000180392 Metap2-013 nonsense_mediated_decay Mus_musculus 0 647
ENSMUST00000180375 Metap2-008 protein_coding Mus_musculus 0 621
ENSMUST00000180688 Metap2-009 protein_coding Mus_musculus 0 503
ENSMUST00000181442 Metap2-012 retained_intron Mus_musculus 0 366
ENSMUST00000181104 Metap2-010 retained_intron Mus_musculus 0 263
ENSMUST00000181236 Metap2-011 retained_intron Mus_musculus 0 263

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