C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xylosyltransferase I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261381 XYLT1-001 ENSG00000103489 9606 - 16:17101769-17470881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000261381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000261381 3.826±0.00 1.849±0.00 0.146±0.00 1.462±0.79 1.996±0.00 3.130±0.00 0.342±0.20 0.719±0.54 0.968±0.80 1.674±0.00 0.611±0.00 1.536±1.51 2.062±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RK CIL_0008RK_0001 VISTA 16:16702491-17303396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005576 IEA extracellular region
GO:0005783 IEA endoplasmic reticulum
GO:0006024 TAS:IEA glycosaminoglycan biosynthetic process
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030158 TAS:IEA protein xylosyltransferase activity
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0034605 IEA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032892 Xylt1-001 protein_coding Mus_musculus 0 3234
ENSMUST00000160035 Xylt1-002 retained_intron Mus_musculus 0 1602
ENSDART00000087118 xylt1-001 protein_coding Danio_rerio 0 795
ENSMUST00000153485 Xylt2-002 nonsense_mediated_decay Mus_musculus 0 477
ENSMUST00000116349 Xylt2-001 protein_coding Mus_musculus 0 477
ENSMUST00000150377 Xylt2-005 protein_coding Mus_musculus 5.60519e-45 189
ENSMUST00000146693 Xylt2-004 nonsense_mediated_decay Mus_musculus 8e-38 165

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