C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xylosyltransferase II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116349 Xylt2-001 ENSMUSG00000020868 10090 - 11:94663851-94677515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116349
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116349 12.095±2.19 11.024±2.36 4.425±0.03 6.555±0.74 9.130±3.83 8.500±1.41 2.846±0.27 5.362±1.40 3.724±2.23 9.970±1.58 0.891±0.43 13.761±5.02 4.221±1.72 0.914±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006024 IMP glycosaminoglycan biosynthetic process
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0030158 IEA protein xylosyltransferase activity
GO:0030166 IMP proteoglycan biosynthetic process
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030210 IMP heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000017003 XYLT2-001 protein_coding Homo_sapiens 0 3458
ENST00000261381 XYLT1-001 protein_coding Homo_sapiens 0 477
ENST00000376550 XYLT2-003 nonsense_mediated_decay Homo_sapiens 0 2152
ENST00000507602 XYLT2-002 protein_coding Homo_sapiens 0 2477
ENST00000509778 XYLT2-004 protein_coding Homo_sapiens 3e-39 163
ENST00000511654 XYLT2-005 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000571021 XYLT2-006 retained_intron Homo_sapiens 0 516
ENST00000574840 XYLT2-007 protein_coding Homo_sapiens 3e-32 143
ENST00000575674 XYLT1-004 retained_intron Homo_sapiens 2e-27 126

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