C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alanyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261772 AARS-001 ENSG00000090861 9606 - 16:70252295-70289543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261772 44.630±0.00 22.169±0.00 7.292±0.00 64.854±39.11 24.314±13.54 14.592±9.43 12.362±7.40 26.270±16.40 16.880±9.00 21.240±12.40 58.628±48.64 42.925±22.27 40.542±5.50 25.160±0.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0001942 IEA hair follicle development
GO:0002161 IEA aminoacyl-tRNA editing activity
GO:0003676 IEA nucleic acid binding
GO:0004813 IEA alanine-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006400 IEA tRNA modification
GO:0006418 TAS tRNA aminoacylation for protein translation
GO:0006419 IEA alanyl-tRNA aminoacylation
GO:0006450 IEA regulation of translational fidelity
GO:0006457 IEA protein folding
GO:0008033 TAS tRNA processing
GO:0008219 IEA cell death
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016597 IEA amino acid binding
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0021680 IEA cerebellar Purkinje cell layer development
GO:0030968 IEA endoplasmic reticulum unfolded protein response
GO:0034620 IEA cellular response to unfolded protein
GO:0043039 IEA tRNA aminoacylation
GO:0043200 IEA response to amino acid
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0043588 IEA skin development
GO:0050885 IEA neuromuscular process controlling balance
GO:0050905 IEA neuromuscular process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034441 Aars-001 protein_coding Mus_musculus 0 3458
ENSDART00000123557 aars-202 protein_coding Danio_rerio 0 1369
ENSDART00000136544 aars-002 protein_coding Danio_rerio 0 1369
ENSDART00000100401 aars-001 protein_coding Danio_rerio 0 1369
ENSMUST00000154546 Aars-003 retained_intron Mus_musculus 0 935
ENSDART00000076695 aars-201 protein_coding Danio_rerio 0 804
ENSMUST00000142770 Aars-002 retained_intron Mus_musculus 0 767
ENSMUST00000124285 Aars-005 retained_intron Mus_musculus 0 466
ENSMUST00000145059 Aars-004 retained_intron Mus_musculus 0 355
ENSDART00000140538 si:ch211-223o1.4p-001 unprocessed_pseudogene Danio_rerio 0 340
ENSDART00000142452 si:dkey-73n10.7p-001 unprocessed_pseudogene Danio_rerio 0 331
ENSDART00000143672 si:dkey-73n10.9p-001 unprocessed_pseudogene Danio_rerio 0 326

Loading