C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alanyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034441 Aars-001 ENSMUSG00000031960 10090 + 8:111033902-111057664 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034441 10.553±2.70 23.786±2.30 10.021±3.18 22.081±4.98 11.218±2.28 14.996±3.29 6.615±2.70 12.763±2.54 21.920±7.72 10.061±1.74 7.202±5.74 26.036±2.64 25.177±8.50 16.058±4.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0001942 IMP hair follicle development
GO:0002161 IDA aminoacyl-tRNA editing activity
GO:0004813 IEA alanine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006400 IMP tRNA modification
GO:0006419 IMP alanyl-tRNA aminoacylation
GO:0006450 IDA regulation of translational fidelity
GO:0006457 IMP protein folding
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016597 IEA amino acid binding
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0030968 IMP endoplasmic reticulum unfolded protein response
GO:0034620 IMP cellular response to unfolded protein
GO:0043200 IMP response to amino acid
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0043588 IMP skin development
GO:0050885 IMP neuromuscular process controlling balance
GO:0050905 IMP neuromuscular process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261772 AARS-001 protein_coding Homo_sapiens 0 3458
ENST00000435634 EXOSC6-001 protein_coding Homo_sapiens 0 911
ENST00000564359 AARS-006 processed_transcript Homo_sapiens 0 580
ENST00000565361 AARS-005 protein_coding Homo_sapiens 0 920
ENST00000569790 AARS-007 processed_transcript Homo_sapiens 0 348
ENST00000569825 AARS-004 retained_intron Homo_sapiens 0 758

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