C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-rich transmembrane module containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261811 CYSTM1-001 ENSG00000120306 9606 + 5:140174642-140243789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261811
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261811 27.794±0.00 13.355±0.00 14.178±2.62 17.560±14.09 18.429±8.56 11.295±8.91 48.063±45.75 6.724±2.48 104.950±0.00 39.850±5.42 30.993±2.22 48.565±15.36 20.575±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZM CIL_0006ZM_0001 CGP 5:140174642-140303121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050584 Cystm1-001 protein_coding Mus_musculus 0 599
ENSMUST00000144158 Cystm1-004 protein_coding Mus_musculus 0 237
ENSMUST00000152804 Cystm1-005 protein_coding Mus_musculus 0 206
ENSMUST00000145439 Cystm1-002 retained_intron Mus_musculus 0 198
ENSMUST00000139727 Cystm1-003 protein_coding Mus_musculus 2e-35 154

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