C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262030 ATP5B-201 ENSG00000110955 9606 - 12:56638179-56646068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262030 106.105±0.00 119.527±0.00 19.245±0.00 143.298±81.36 98.304±81.26 99.703±58.74 509.305±446.13 279.876±248.44 109.463±90.85 87.711±77.55 195.357±102.52 172.524±86.45 235.262±87.90 129.942±22.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001649 IDA osteoblast differentiation
GO:0005215 NAS transporter activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005753 IDA mitochondrial proton-transporting ATP synthase complex
GO:0005754 NAS mitochondrial proton-transporting ATP synthase, catalytic core
GO:0005759 NAS mitochondrial matrix
GO:0005886 IDA plasma membrane
GO:0006091 NAS generation of precursor metabolites and energy
GO:0006200 IDA ATP catabolic process
GO:0006629 IEA lipid metabolic process
GO:0006754 IMP ATP biosynthetic process
GO:0006933 IEA negative regulation of cell adhesion involved in substrate-bound cell migration
GO:0009986 IDA cell surface
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IMP:IEA proton transport
GO:0016020 IDA membrane
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0016887 IDA ATPase activity
GO:0022857 IC transmembrane transporter activity
GO:0022904 TAS respiratory electron transport chain
GO:0031966 IDA mitochondrial membrane
GO:0033178 IEA proton-transporting two-sector ATPase complex, catalytic domain
GO:0042288 IDA MHC class I protein binding
GO:0042645 IDA mitochondrial nucleoid
GO:0042776 IC mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046034 IEA ATP metabolic process
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IMP proton-transporting ATPase activity, rotational mechanism
GO:0051453 IMP regulation of intracellular pH
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026459 Atp5b-001 protein_coding Mus_musculus 0 2032
ENSMUST00000126040 Atp5b-005 retained_intron Mus_musculus 0 1024
ENSMUST00000124993 Atp5b-006 processed_transcript Mus_musculus 0 688
ENSMUST00000139295 Atp5b-003 retained_intron Mus_musculus 0 424
ENSMUST00000126751 Atp5b-009 processed_transcript Mus_musculus 0 416
ENSMUST00000171504 Gm4707-001 translated_processed_pseudogene Mus_musculus 0 407
ENSMUST00000144918 Atp5b-007 retained_intron Mus_musculus 0 396
ENSMUST00000127439 Atp5b-002 processed_transcript Mus_musculus 0 333
ENSMUST00000123803 Atp5b-008 retained_intron Mus_musculus 0 322

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