C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inversin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262456 INVS-001 ENSG00000119509 9606 + 9:100099275-100300788 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000262456
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000262456 0.994±0.00 2.286±0.00 0.396±0.00 0.895±0.00 1.859±0.00 1.412±0.00 1.447±1.18 0.474±0.06 1.281±0.65 0.553±0.20 0.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000229 CIL_000229_0002 CGP 9:99979179-100301000
CIL_00022A CIL_00022A_0002 CGP 9:100099256-100352939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0005929 IEA cilium
GO:0016020 IEA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030029 Invs-001 protein_coding Mus_musculus 0 2165
ENSMUST00000143433 Invs-004 nonsense_mediated_decay Mus_musculus 0 979
ENSMUST00000129480 Invs-006 processed_transcript Mus_musculus 0 516

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