C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament) muscle Z-line, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263168 CAPZA1-001 ENSG00000116489 9606 + 1:112619173-112671619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263168 26.706±0.00 20.416±0.00 5.679±0.00 5.610±1.48 21.785±6.71 17.841±2.84 6.026±2.38 18.750±4.81 13.073±3.67 32.666±3.10 2.577±1.80 17.101±6.24 20.627±6.07 44.939±12.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U7 CIL_0006U7_0002 CGP 1:112466541-112620825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0006461 TAS protein complex assembly
GO:0006928 TAS cellular component movement
GO:0007596 TAS blood coagulation
GO:0008290 IEA F-actin capping protein complex
GO:0015629 TAS actin cytoskeleton
GO:0030036 IEA actin cytoskeleton organization
GO:0045087 TAS innate immune response
GO:0051016 IEA barbed-end actin filament capping
GO:0051693 IEA actin filament capping
GO:0070062 IDA extracellular vesicular exosome
GO:0071203 IDA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094028 Capza1-001 protein_coding Mus_musculus 0 1653
ENSMUST00000086725 Gm3608-201 pseudogene Mus_musculus 0 1543
ENSMUST00000187390 RP24-207M20.2-001 processed_pseudogene Mus_musculus 0 1131
ENSMUST00000068894 4933400A11Rik-003 protein_coding Mus_musculus 0 588
ENSMUST00000112102 4933400A11Rik-002 protein_coding Mus_musculus 0 588
ENSMUST00000068874 4933400A11Rik-001 protein_coding Mus_musculus 0 588
ENSDART00000046973 capza1a-201 protein_coding Danio_rerio 0 496
ENSMUST00000155476 Capza1-002 retained_intron Mus_musculus 0 211

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