C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament) muscle Z-line, alpha 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000046973 capza1a-201 ENSDARG00000034240 7955 - 6:48263842-48287992 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000046973
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000046973 24.573±5.26 23.917±15.54 44.806±8.61 1.655±0.00 21.794±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0008290 IEA F-actin capping protein complex
GO:0030018 IDA Z disc
GO:0030036 IEA actin cytoskeleton organization
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015877 Capza2-001 protein_coding Mus_musculus 0 370
ENSMUST00000086725 Gm3608-201 pseudogene Mus_musculus 0 497
ENSMUST00000094028 Capza1-001 protein_coding Mus_musculus 0 505
ENSMUST00000130606 Capza2-007 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000142592 Capza2-004 retained_intron Mus_musculus 0 219
ENSMUST00000187390 RP24-207M20.2-001 processed_pseudogene Mus_musculus 0 411
ENST00000263168 CAPZA1-001 protein_coding Homo_sapiens 0 496
ENST00000498626 CAPZA1-004 processed_transcript Homo_sapiens 0 278

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