C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2R 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263228 UBE2R2-001 ENSG00000107341 9606 + 9:33817567-33920404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263228 26.464±0.00 13.601±0.00 4.180±0.00 13.758±7.42 12.159±3.59 15.226±9.10 8.679±6.21 9.268±3.53 8.703±3.51 15.412±11.01 18.869±12.72 14.499±5.97 18.688±7.13 46.724±15.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AS CIL_0006AS_0001 CGP 9:33817567-34048949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0006513 IDA protein monoubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040008 Ube2r2-001 protein_coding Mus_musculus 0 1736
ENSMUST00000123642 Ube2r2-003 retained_intron Mus_musculus 0 747
ENSMUST00000129874 Ube2r2-002 retained_intron Mus_musculus 0 662

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