C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: crystallin, gamma D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264376 CRYGD-001 ENSG00000118231 9606 - 2:208121607-208124501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENST00000264376
Transcript ID Brain Ovary Placenta Testis
ENST00000264376 0.966±0.00 3.014±1.35 0.246±0.00 0.322±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AK CIL_0000AK_000Z CGP 2:208121607-208129830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002088 ISS lens development in camera-type eye
GO:0005212 NAS structural constituent of eye lens
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0007601 IMP visual perception
GO:0034614 IDA cellular response to reactive oxygen species
GO:0070306 ISS lens fiber cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045028 Crygd-001 protein_coding Mus_musculus 0 651
ENSMUST00000087359 Cryge-001 protein_coding Mus_musculus 0 630
ENSMUST00000027082 Crygf-001 protein_coding Mus_musculus 0 627
ENSMUST00000161960 Cryge-002 protein_coding Mus_musculus 0 606
ENSMUST00000114027 Crygf-002 protein_coding Mus_musculus 0 564
ENSMUST00000127762 Crygd-002 retained_intron Mus_musculus 0 344
ENSMUST00000146122 Crygd-003 protein_coding Mus_musculus 0 322

Loading