C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265348 CUL7-001 ENSG00000044090 9606 - 6:43037617-43053699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265348
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265348 7.593±0.00 7.560±0.00 2.628±0.98 3.861±1.68 2.325±0.72 1.723±0.88 7.669±5.46 0.792±0.00 4.280±0.00 11.014±8.87 7.675±4.37 10.284±4.52 5.440±1.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0000281 IMP mitotic cytokinesis
GO:0001570 ISS vasculogenesis
GO:0001837 IDA epithelial to mesenchymal transition
GO:0001890 IDA placenta development
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005680 NAS anaphase-promoting complex
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0006508 NAS proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0007030 ISS Golgi organization
GO:0007088 IMP regulation of mitosis
GO:0016032 IEA viral process
GO:0016567 IEA protein ubiquitination
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031467 IDA Cul7-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0044267 TAS cellular protein metabolic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050775 ISS positive regulation of dendrite morphogenesis
GO:1990393 IDA 3M complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043464 Cul7-001 protein_coding Mus_musculus 0 2909
ENSMUST00000145567 Cul7-002 nonsense_mediated_decay Mus_musculus 0 2843
ENSMUST00000133393 Cul7-003 nonsense_mediated_decay Mus_musculus 0 1890
ENSMUST00000132790 Cul7-004 retained_intron Mus_musculus 0 1291
ENSMUST00000151002 Cul7-005 retained_intron Mus_musculus 0 1149
ENSMUST00000066026 Cul9-201 protein_coding Mus_musculus 0 913
ENSMUST00000182485 Cul9-001 protein_coding Mus_musculus 0 913
ENSMUST00000182530 Cul9-003 retained_intron Mus_musculus 0 869
ENSMUST00000182315 Cul9-004 retained_intron Mus_musculus 0 863
ENSMUST00000125949 Cul7-006 retained_intron Mus_musculus 0 850
ENSMUST00000182799 Cul9-007 retained_intron Mus_musculus 0 547
ENSMUST00000144966 Cul7-007 processed_transcript Mus_musculus 0 285
ENSMUST00000183016 Cul9-008 retained_intron Mus_musculus 0 219
ENSMUST00000183078 Cul9-002 retained_intron Mus_musculus 0 219
ENSMUST00000182668 Cul9-005 retained_intron Mus_musculus 0 204

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