C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043464 Cul7-001 ENSMUSG00000038545 10090 + 17:46650337-46664364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043464
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043464 11.279±3.30 8.297±2.54 3.626±0.28 11.621±7.60 9.226±4.26 3.621±1.43 2.969±0.78 4.943±1.13 3.402±2.43 7.254±1.71 0.695±0.31 16.672±7.56 26.894±11.71 1.091±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0000281 ISS mitotic cytokinesis
GO:0001570 IMP vasculogenesis
GO:0001837 ISS epithelial to mesenchymal transition
GO:0001890 ISS placenta development
GO:0005515 IPI protein binding
GO:0005622 IC intracellular
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005794 ISS Golgi apparatus
GO:0005813 ISS centrosome
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006915 RCA apoptotic process
GO:0007030 ISS Golgi organization
GO:0007088 ISS regulation of mitosis
GO:0016567 ISS protein ubiquitination
GO:0031467 IDA Cul7-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0042981 RCA regulation of apoptotic process
GO:0045601 NAS regulation of endothelial cell differentiation
GO:0048471 ISS perinuclear region of cytoplasm
GO:0050775 ISS positive regulation of dendrite morphogenesis
GO:1990393 ISS 3M complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252050 CUL9-001 protein_coding Homo_sapiens 0 933
ENST00000265348 CUL7-001 protein_coding Homo_sapiens 0 2909
ENST00000372647 CUL9-005 protein_coding Homo_sapiens 0 933
ENST00000478630 CUL7-002 processed_transcript Homo_sapiens 0 763
ENST00000510282 CUL9-004 retained_intron Homo_sapiens 0.00000000000003 84
ENST00000515773 CUL9-002 retained_intron Homo_sapiens 0 933
ENST00000535468 CUL7-201 protein_coding Homo_sapiens 0 2909

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