C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265381 APBA1-001 ENSG00000107282 9606 - 9:69427530-69672306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265381
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265381 0.824±0.00 0.244±0.00 10.768±3.44 1.484±0.00 1.088±0.48 1.171±0.00 0.541±0.06 0.335±0.07 0.470±0.00 1.091±0.83 1.208±0.31 2.200±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001540 IEA beta-amyloid binding
GO:0001701 IEA in utero embryonic development
GO:0005515 IPI:IEA protein binding
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006886 IEA intracellular protein transport
GO:0007155 TAS cell adhesion
GO:0007268 IEA synaptic transmission
GO:0007399 TAS nervous system development
GO:0007626 IEA locomotory behavior
GO:0008021 TAS synaptic vesicle
GO:0008088 TAS axon cargo transport
GO:0010468 IEA regulation of gene expression
GO:0014047 IEA glutamate secretion
GO:0014051 IEA gamma-aminobutyric acid secretion
GO:0016020 IEA membrane
GO:0030165 IEA PDZ domain binding
GO:0032403 IEA protein complex binding
GO:0035264 IEA multicellular organism growth
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025830 Apba1-201 protein_coding Mus_musculus 0 3373
ENSDART00000114483 apba1b-201 protein_coding Danio_rerio 0 821
ENSDART00000140511 apba1b-001 protein_coding Danio_rerio 0 793
ENSDART00000137719 apba1b-002 retained_intron Danio_rerio 0 484

Loading