C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor interactor 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267622 TRIP11-001 ENSG00000100815 9606 - 14:91965991-92040059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000267622
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000267622 1.174±0.00 2.235±0.00 1.169±0.00 1.411±0.00 1.757±0.60 1.596±0.28 1.985±0.96 1.956±0.67 1.018±0.46 2.005±1.25 1.203±0.27 3.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0002 CGP 14:91869412-92040896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0002079 IEA inner acrosomal membrane
GO:0002080 IEA acrosomal membrane
GO:0002081 IEA outer acrosomal membrane
GO:0003281 IEA ventricular septum development
GO:0003713 TAS transcription coactivator activity
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0005840 IEA ribosome
GO:0005856 IEA cytoskeleton
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006412 IEA translation
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021605 Trip11-001 protein_coding Mus_musculus 0 5574
ENSMUST00000177183 Trip11-007 protein_coding Mus_musculus 0 4289
ENSMUST00000177536 Trip11-003 protein_coding Mus_musculus 0 1343
ENSMUST00000176728 Trip11-006 protein_coding Mus_musculus 0 743
ENSMUST00000177480 Trip11-004 nonsense_mediated_decay Mus_musculus 0 398
ENSMUST00000085086 Trip11-002 processed_transcript Mus_musculus 0 202
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000008 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000001 62

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