C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor interactor 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021605 Trip11-001 ENSMUSG00000021188 10090 - 12:101834043-101913267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021605 1.050±0.65 1.329±0.41 3.678±1.57 1.684±0.63 1.151±0.13 0.817±0.26 0.928±0.38 1.062±0.39 1.275±0.51 2.362±0.55 0.878±0.34 1.824±0.63 2.953±0.84 0.953±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0003 CGP 12:101746565-101913267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0002079 IEA inner acrosomal membrane
GO:0002080 IDA acrosomal membrane
GO:0002081 IEA outer acrosomal membrane
GO:0003281 IMP ventricular septum development
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0005801 IDA cis-Golgi network

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267622 TRIP11-001 protein_coding Homo_sapiens 0 5574
ENST00000548943 RP11-185N2.1-001 processed_pseudogene Homo_sapiens 0 1332
ENST00000554357 TRIP11-002 protein_coding Homo_sapiens 0 4414
ENST00000555105 TRIP11-003 processed_transcript Homo_sapiens 0 241
ENST00000555516 TRIP11-005 protein_coding Homo_sapiens 0 488
ENST00000557017 TRIP11-004 nonsense_mediated_decay Homo_sapiens 0 599
ENST00000558190 ATXN3-001 protein_coding Homo_sapiens 0 202
ENST00000620738 TRIP11-201 protein_coding Homo_sapiens 0 5450

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