C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fem-1 homolog a (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269856 FEM1A-001 ENSG00000141965 9606 + 19:4791681-4801273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000269856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000269856 0.369±0.00 1.059±0.00 0.135±0.00 0.531±0.42 0.568±0.38 0.407±0.24 0.148±0.00 0.406±0.22 0.224±0.00 0.173±0.07 0.376±0.27 0.477±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028D CIL_00028D_0001 CGP 19:4675224-4801273
CIL_00028H CIL_00028H_0001 CGP 19:4791681-4831704

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0031867 IPI EP4 subtype prostaglandin E2 receptor binding
GO:0050728 IDA negative regulation of inflammatory response
GO:0051438 ISS regulation of ubiquitin-protein transferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060253 Fem1a-201 protein_coding Mus_musculus 0 1094
ENSMUST00000104962 4931440F15Rik-001 protein_coding Mus_musculus 0 1075
ENSDART00000097991 fem1a-201 protein_coding Danio_rerio 0 486
ENSDART00000017718 fem1c-201 protein_coding Danio_rerio 0 468

Loading