C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | otoferlin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000272371  |
OTOF-001 |
ENSG00000115155 |
9606 | - |
2:26457203-26558698  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007DO | CIL_0007DO_0001 | CGP | 2:26401916-26558698 |
| CIL_0007WF | CIL_0007WF_0001 | VISTA | 2:26419781-27023232 |
| CIL_0007DN | CIL_0007DN_0001 | CGP | 2:26457203-26579532 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005509 | ISS | calcium ion binding |
| GO:0005515 | IEA | protein binding |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005829 | TAS | cytosol |
| GO:0005886 | IEA | plasma membrane |
| GO:0007605 | IEA | sensory perception of sound |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016079 | ISS | synaptic vesicle exocytosis |
| GO:0030054 | IEA | cell junction |
| GO:0030672 | ISS | synaptic vesicle membrane |
| GO:0035612 | IEA | AP-2 adaptor complex binding |
| GO:0061025 | TAS | membrane fusion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000074171
|
Otof-201 | protein_coding | Mus_musculus | 0 | 7616 |
|
ENSMUST00000144125
|
Otof-001 | protein_coding | Mus_musculus | 0 | 7382 |
|
ENSMUST00000150734
|
Otof-003 | retained_intron | Mus_musculus | 0 | 4093 |
|
ENSMUST00000114747
|
Otof-202 | protein_coding | Mus_musculus | 0 | 4000 |
|
ENSMUST00000133509
|
Otof-002 | protein_coding | Mus_musculus | 0 | 4000 |
