C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: otoferlin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074171 Otof-201 ENSMUSG00000062372 10090 - 5:30367066-30461932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMusclePlacentaTestisENSMUST00000074171
Transcript ID Brain Heart Muscle Placenta Testis
ENSMUST00000074171 0.730±0.09 0.026±0.01 0.036±0.00 0.013±0.00 0.107±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DO CIL_0007DO_0002 CGP 5:30281388-30461932
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_0007DN CIL_0007DN_0002 CGP 5:30367066-30484088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0035612 IDA AP-2 adaptor complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272371 OTOF-001 protein_coding Homo_sapiens 0 7616
ENST00000338581 OTOF-002 protein_coding Homo_sapiens 0 2963
ENST00000339598 OTOF-003 protein_coding Homo_sapiens 0 2564
ENST00000402415 OTOF-004 protein_coding Homo_sapiens 0 4900
ENST00000403946 OTOF-005 protein_coding Homo_sapiens 0 7217
ENST00000426958 OTOF-007 protein_coding Homo_sapiens 0 383
ENST00000464574 OTOF-006 retained_intron Homo_sapiens 0 894

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