C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vestigial-like family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273038 VGLL4-001 ENSG00000144560 9606 - 3:11556070-11720746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyOvaryPlacentaENST00000273038
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Ovary Placenta
ENST00000273038 4.354±0.00 2.977±0.00 5.049±0.00 5.655±0.00 3.478±0.77 0.921±0.00 4.003±0.00 5.775±0.38 7.679±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061H CIL_00061H_0001 CGP 3:11137093-11557665
CIL_0005SK CIL_0005SK_0001 CGP 3:11272309-11771350
CIL_0004KR CIL_0004KR_0001 CGP 3:11556070-11846919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032459 Vgll4-001 protein_coding Mus_musculus 0 913
ENSMUST00000152710 Vgll4-002 processed_transcript Mus_musculus 0 682
ENSMUST00000169310 Atg7-006 protein_coding Mus_musculus 0 381
ENSMUST00000032457 Atg7-001 protein_coding Mus_musculus 0 381

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