C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005SK_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000197548-ENSG00000144560 | CGP | 9606 | 3:11272309-11771350  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000144560  (VGLL4)vestigial-like family member 4 |
ENST00000273038 (VGLL4-001)
|
11556070-11720746 | protein_coding | |
|
ENST00000413604 (VGLL4-004)
|
11558069-11604581 | protein_coding | ||
|
ENST00000414047 (VGLL4-019)
|
11720456-11724979 | processed_transcript | ||
|
ENST00000417206 (VGLL4-015)
|
11564766-11719638 | protein_coding | ||
|
ENST00000417466 (VGLL4-016)
|
11564848-11719619 | protein_coding | ||
|
ENST00000418000 (VGLL4-017)
|
11559332-11719594 | protein_coding | ||
|
ENST00000419541 (VGLL4-013)
|
11564892-11710537 | protein_coding | ||
|
ENST00000424529 (VGLL4-006)
|
11558470-11568924 | protein_coding | ||
|
ENST00000424709 (VGLL4-007)
|
11564852-11612667 | protein_coding | ||
|
ENST00000426568 (VGLL4-002)
|
11558476-11720722 | protein_coding | ||
|
ENST00000430365 (VGLL4-003)
|
11558476-11643924 | protein_coding | ||
|
ENST00000437722 (VGLL4-008)
|
11564915-11610504 | protein_coding | ||
|
ENST00000445411 (VGLL4-014)
|
11558758-11720729 | protein_coding | ||
|
ENST00000451674 (VGLL4-005)
|
11558343-11582391 | protein_coding | ||
|
ENST00000458499 (VGLL4-010)
|
11559351-11627406 | protein_coding | ||
|
ENST00000463387 (VGLL4-012)
|
11699546-11720460 | processed_transcript | ||
|
ENST00000480288 (VGLL4-009)
|
11601992-11633671 | processed_transcript | ||
|
ENST00000623028 (VGLL4-020)
|
11601910-11771350 | protein_coding | ||
|
ENSG00000197548 (ATG7) autophagy related 7 |
ENST00000354449 (ATG7-001)
|
11272416-11557665 | protein_coding | |
|
ENST00000354956 (ATG7-004)
|
11272416-11555083 | protein_coding | ||
|
ENST00000414717 (ATG7-020)
|
11364657-11446936 | protein_coding | ||
|
ENST00000418682 (ATG7-012)
|
11272406-11315482 | nonsense_mediated_decay | ||
|
ENST00000419112 (ATG7-006)
|
11272423-11306995 | protein_coding | ||
|
ENST00000423116 (ATG7-008)
|
11277219-11309028 | protein_coding | ||
|
ENST00000424071 (ATG7-015)
|
11309009-11358610 | nonsense_mediated_decay | ||
|
ENST00000427759 (ATG7-021)
|
11364658-11477307 | protein_coding | ||
|
ENST00000434066 (ATG7-016)
|
11313343-11342279 | nonsense_mediated_decay | ||
|
ENST00000435760 (ATG7-007)
|
11272348-11299400 | protein_coding | ||
|
ENST00000444619 (ATG7-005)
|
11272403-11307008 | protein_coding | ||
|
ENST00000446110 (ATG7-022)
|
11364659-11510339 | protein_coding | ||
|
ENST00000446450 (ATG7-002)
|
11272416-11554988 | protein_coding | ||
|
ENST00000451513 (ATG7-009)
|
11272309-11313420 | protein_coding | ||
|
ENST00000451830 (ATG7-010)
|
11272348-11315388 | protein_coding | ||
|
ENST00000460291 (ATG7-018)
|
11342200-11348747 | retained_intron | ||
|
ENST00000460444 (ATG7-023)
|
11272375-11304667 | processed_transcript | ||
|
ENST00000461278 (ATG7-025)
|
11332713-11342207 | retained_intron | ||
|
ENST00000464282 (ATG7-014)
|
11308475-11313396 | processed_transcript | ||
|
ENST00000467121 (ATG7-026)
|
11360581-11363096 | retained_intron | ||
|
ENST00000469654 (ATG7-024)
|
11272443-11304549 | processed_transcript | ||
|
ENST00000470474 (ATG7-011)
|
11272382-11299170 | retained_intron | ||
|
ENST00000478638 (ATG7-017)
|
11331402-11347971 | processed_transcript | ||
|
ENST00000488924 (ATG7-013)
|
11308442-11331393 | processed_transcript | ||
|
ENSG00000226621 (AC083855.5) |
ENST00000440041 (AC083855.5-001)
|
11290406-11290663 | processed_pseudogene | |
|
ENSG00000235240 (AC026185.1) |
ENST00000445748 (AC026185.1-001)
|
11488300-11488473 | processed_pseudogene | |
|
ENSG00000270531 (RP11-169K17.2) |
ENST00000605193 (RP11-169K17.2-001)
|
11529488-11529755 | processed_pseudogene | |
|
ENSG00000272483 (RP11-169K17.3) |
ENST00000606330 (RP11-169K17.3-001)
|
11611602-11612197 | antisense | |
| CIL_0005SK_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000030314-ENSMUSG00000030315 | CGP | 10090 | 6:114643097-114969994 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000030314 (Atg7) autophagy related 7 |
ENSMUST00000032457 (Atg7-001)
|
114643097-114860614 | protein_coding | |
|
ENSMUST00000169310 (Atg7-006)
|
114643112-114860612 | protein_coding | ||
|
ENSMUST00000182034 (Atg7-009)
|
114652436-114686202 | protein_coding | ||
|
ENSMUST00000182035 (Atg7-011)
|
114643131-114686219 | protein_coding | ||
|
ENSMUST00000182098 (Atg7-007)
|
114643127-114673115 | protein_coding | ||
|
ENSMUST00000182169 (Atg7-012)
|
114643118-114677998 | protein_coding | ||
|
ENSMUST00000182428 (Atg7-003)
|
114643129-114859230 | protein_coding | ||
|
ENSMUST00000182510 (Atg7-008)
|
114648846-114684517 | protein_coding | ||
|
ENSMUST00000182771 (Atg7-010)
|
114658064-114673696 | protein_coding | ||
|
ENSMUST00000182793 (Atg7-004)
|
114643127-114859221 | protein_coding | ||
|
ENSMUST00000182860 (Atg7-014)
|
114723100-114859224 | processed_transcript | ||
|
ENSMUST00000182902 (Atg7-005)
|
114643129-114859224 | protein_coding | ||
|
ENSMUST00000182934 (Atg7-015)
|
114856151-114859222 | processed_transcript | ||
|
ENSMUST00000183127 (Atg7-013)
|
114643116-114684913 | retained_intron | ||
|
ENSMUST00000183165 (Atg7-002)
|
114643122-114859130 | protein_coding | ||
|
ENSMUSG00000030315 (Vgll4) vestigial like 4 (Drosophila) |
ENSMUST00000032459 (Vgll4-001)
|
114861424-114921821 | protein_coding | |
|
ENSMUST00000123478 (Vgll4-006)
|
114862191-114864757 | processed_transcript | ||
|
ENSMUST00000139640 (Vgll4-003)
|
114862764-114969994 | protein_coding | ||
|
ENSMUST00000147639 (Vgll4-004)
|
114862321-114969180 | protein_coding | ||
|
ENSMUST00000152710 (Vgll4-002)
|
114860628-114875107 | processed_transcript | ||
|
ENSMUST00000155620 (Vgll4-005)
|
114862191-114875020 | processed_transcript | ||
Expression Patterns
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