C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA0226
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273582 KIAA0226-001 ENSG00000145016 9606 - 3:197671393-197749699 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000273582
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000273582 7.011±0.00 5.365±2.81 2.998±0.83 3.189±1.64 4.120±0.00 1.397±0.00 1.692±0.00 4.524±2.66 1.691±0.16 9.282±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0001 CGP 3:197671393-197787596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005794 IDA Golgi apparatus
GO:0006897 IEA endocytosis
GO:0006914 IEA autophagy
GO:0008219 IEA cell death
GO:0010507 IMP negative regulation of autophagy
GO:0045806 IMP negative regulation of endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115105 1700021K19Rik-201 protein_coding Mus_musculus 0 1903
ENSMUST00000119810 1700021K19Rik-002 protein_coding Mus_musculus 0 1903
ENSMUST00000135480 1700021K19Rik-003 retained_intron Mus_musculus 0 1903
ENSMUST00000040986 1700021K19Rik-001 protein_coding Mus_musculus 0 1903
ENSMUST00000089684 1700021K19Rik-004 protein_coding Mus_musculus 0 1903
ENSMUST00000153556 1700021K19Rik-007 retained_intron Mus_musculus 0 318
ENSMUST00000140229 1700021K19Rik-005 retained_intron Mus_musculus 0 313
ENSMUST00000152920 1700021K19Rik-008 retained_intron Mus_musculus 0 296

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