C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700021K19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115105 1700021K19Rik-201 ENSMUSG00000035629 10090 - 16:32821703-32868366 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryPlacentaENSMUST00000115105
Transcript ID Adrenal Breast Liver Ovary Placenta
ENSMUST00000115105 3.103±0.91 4.445±0.33 1.040±0.08 3.154±0.70 7.789±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796
CIL_0006CE CIL_0006CE_0002 CGP 16:32821703-32908963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005764 IEA lysosome
GO:0006897 IEA endocytosis
GO:0006914 IEA autophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273582 KIAA0226-001 protein_coding Homo_sapiens 0 1903
ENST00000296343 KIAA0226-011 protein_coding Homo_sapiens 0 1897
ENST00000413360 KIAA0226-005 protein_coding Homo_sapiens 0 1908
ENST00000415452 KIAA0226-004 protein_coding Homo_sapiens 0 1057
ENST00000447048 KIAA0226-009 protein_coding Homo_sapiens 0 521
ENST00000449205 KIAA0226-003 protein_coding Homo_sapiens 0 1166
ENST00000467303 KIAA0226-006 processed_transcript Homo_sapiens 0 601
ENST00000471364 KIAA0226-010 retained_intron Homo_sapiens 0 311
ENST00000474214 KIAA0226-008 protein_coding Homo_sapiens 0 448

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