C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274026 CCNA2-001 ENSG00000145386 9606 - 4:121816444-121823932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungPlacentaENST00000274026
Transcript ID Bladder Colon Lung Placenta
ENST00000274026 0.193±0.00 0.975±0.00 0.436±0.04 3.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KG CIL_0000KG_0001 CGP 4:121801317-121823933
CIL_0000KF CIL_0000KF_0001 CGP 4:121816444-121870497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0001939 IEA female pronucleus
GO:0001940 IEA male pronucleus
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0007095 TAS mitotic G2 DNA damage checkpoint
GO:0007265 IEP Ras protein signal transduction
GO:0010389 IEA regulation of G2/M transition of mitotic cell cycle
GO:0019901 IEA protein kinase binding
GO:0031100 IEA organ regeneration
GO:0032355 IEA response to estradiol
GO:0033762 IEA response to glucagon
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0048146 IEA positive regulation of fibroblast proliferation
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029270 Ccna2-001 protein_coding Mus_musculus 0 1397
ENSMUST00000147380 Ccna2-004 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000156575 Ccna2-003 processed_transcript Mus_musculus 0 327

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