C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145386-ENSG00000138686 CGP 9606 4:121816444-121870497
GeneTranscriptPositionBiotype
ENSG00000123737 (EXOSC9)
exosome component 9 		ENST00000243498 (EXOSC9-001) 121801317-121816909 protein_coding
ENST00000379663 (EXOSC9-003) 121801320-121816909 protein_coding
ENST00000503139 (EXOSC9-006) 121804734-121814627 processed_transcript
ENST00000503236 (EXOSC9-012) 121809986-121816840 processed_transcript
ENST00000506201 (EXOSC9-010) 121804499-121807868 retained_intron
ENST00000508212 (EXOSC9-009) 121802738-121813293 processed_transcript
ENST00000509800 (EXOSC9-008) 121801346-121811660 protein_coding
ENST00000509980 (EXOSC9-002) 121801318-121815403 processed_transcript
ENST00000511132 (EXOSC9-011) 121804732-121814047 protein_coding
ENST00000511454 (EXOSC9-007) 121801325-121811641 nonsense_mediated_decay
ENST00000512454 (EXOSC9-005) 121801593-121816911 protein_coding
ENST00000513654 (EXOSC9-004) 121801323-121817021 nonsense_mediated_decay
ENSG00000138686 (BBS7)
Bardet-Biedl syndrome 7 		ENST00000264499 (BBS7-001) 121824440-121870497 protein_coding
ENST00000502444 (BBS7-004) 121861294-121870487 retained_intron
ENST00000505692 (BBS7-005) 121858603-121861679 retained_intron
ENST00000506636 (BBS7-003) 121827727-121870450 protein_coding
ENST00000507814 (BBS7-007) 121824924-121828673 protein_coding
ENST00000508536 (BBS7-006) 121855430-121859023 retained_intron
ENSG00000145386 (CCNA2)
cyclin A2 		ENST00000274026 (CCNA2-001) 121816444-121823932 protein_coding
ENST00000618014 (CCNA2-201) 121816445-121823933 protein_coding
CIL_0000KF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027715-ENSMUSG00000037325 CGP 10090 3:36564866-36613477
GeneTranscriptPositionBiotype
ENSMUSG00000027714 (Exosc9)
exosome component 9 		ENSMUST00000029269 (Exosc9-001) 36552606-36565729 protein_coding
ENSMUST00000131316 (Exosc9-008) 36562096-36565645 protein_coding
ENSMUST00000133854 (Exosc9-005) 36552651-36561405 retained_intron
ENSMUST00000136890 (Exosc9-006) 36552638-36556951 protein_coding
ENSMUST00000138636 (Exosc9-009) 36552614-36556777 retained_intron
ENSMUST00000149041 (Exosc9-007) 36552627-36556997 retained_intron
ENSMUST00000155866 (Exosc9-002) 36552606-36563271 nonsense_mediated_decay
ENSMUST00000156100 (Exosc9-010) 36555553-36563246 processed_transcript
ENSMUSG00000027715 (Ccna2)
cyclin A2 		ENSMUST00000029270 (Ccna2-001) 36564866-36572150 protein_coding
ENSMUST00000145309 (Ccna2-002) 36570451-36571964 processed_transcript
ENSMUST00000147380 (Ccna2-004) 36565978-36571927 nonsense_mediated_decay
ENSMUST00000156575 (Ccna2-003) 36565635-36566845 processed_transcript
ENSMUSG00000037325 (Bbs7)
Bardet-Biedl syndrome 7 (human) 		ENSMUST00000040148 (Bbs7-002) 36573142-36613389 protein_coding
ENSMUST00000108155 (Bbs7-003) 36574871-36613285 protein_coding
ENSMUST00000108156 (Bbs7-001) 36573142-36613477 protein_coding
ENSMUST00000129671 (Bbs7-004) 36609337-36613389 retained_intron
ENSMUST00000142333 (Bbs7-005) 36610182-36613389 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KF_0001ENSG00000123737ENST00000243498ENST00000379663ENST00000503139ENST00000503236ENST00000506201ENST00000508212ENST00000509800ENST00000509980ENST00000511132ENST00000511454ENST00000512454ENST00000513654ENSG00000138686ENST00000264499ENST00000502444ENST00000505692ENST00000506636ENST00000507814ENST00000508536ENSG00000145386ENST00000274026ENST00000618014CIL_0000KF_0002ENSMUSG00000027714ENSMUST00000029269ENSMUST00000131316ENSMUST00000133854ENSMUST00000136890ENSMUST00000138636ENSMUST00000149041ENSMUST00000155866ENSMUST00000156100ENSMUSG00000027715ENSMUST00000029270ENSMUST00000145309ENSMUST00000147380ENSMUST00000156575ENSMUSG00000037325ENSMUST00000040148ENSMUST00000108155ENSMUST00000108156ENSMUST00000129671ENSMUST00000142333
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KF_0001ENSG00000123737ENST00000243498ENST00000379663ENST00000503236ENST00000509800ENST00000509980ENST00000511132ENST00000513654ENSG00000138686ENST00000264499ENST00000502444ENST00000505692ENST00000506636ENST00000507814ENSG00000145386ENST00000274026ENST00000618014CIL_0000KF_0002ENSMUSG00000027714ENSMUST00000029269ENSMUST00000131316ENSMUST00000136890ENSMUST00000149041ENSMUST00000155866ENSMUSG00000027715ENSMUST00000029270ENSMUST00000145309ENSMUST00000147380ENSMUSG00000037325ENSMUST00000040148ENSMUST00000108155ENSMUST00000108156ENSMUST00000129671ENSMUST00000142333
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123737 ENST00000243498 2.582±0.00 3.317±0.00 N/A 4.416±0.48 2.233±0.58 2.298±0.17 2.975±1.80 2.409±0.00 2.106±0.00 1.981±0.09 1.540±0.00 11.153±6.80 11.065±7.87 49.503±24.27
ENST00000379663 1.552±0.00 N/A N/A N/A N/A 1.855±0.00 2.125±0.00 1.442±0.00 3.204±0.00 1.316±0.00 2.522±1.85 N/A 1.782±0.00 N/A
ENST00000503139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503236 N/A N/A 1.673±0.00 3.485±0.00 2.644±0.00 N/A 1.062±0.00 N/A N/A 2.327±0.00 N/A N/A N/A N/A
ENST00000506201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.114±0.00 N/A N/A N/A
ENST00000509980 3.038±0.00 6.501±0.00 0.803±0.00 4.341±0.00 2.365±0.00 N/A N/A 1.319±0.24 1.709±0.00 N/A N/A 2.342±0.00 N/A 29.712±8.89
ENST00000511132 4.432±0.00 N/A N/A N/A 4.530±0.00 N/A N/A N/A N/A N/A 2.225±1.10 N/A N/A N/A
ENST00000511454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513654 N/A N/A N/A 0.598±0.24 0.392±0.00 0.631±0.00 0.101±0.00 N/A 0.439±0.00 0.386±0.02 N/A 1.069±0.57 N/A N/A
ENSG00000138686 ENST00000264499 0.986±0.00 1.076±0.00 N/A 3.366±1.23 0.837±0.25 1.166±0.37 0.306±0.00 0.787±0.56 1.151±1.02 1.757±0.61 0.209±0.00 1.653±0.52 0.408±0.17 1.801±0.04
ENST00000502444 N/A N/A 2.149±0.00 N/A N/A N/A N/A N/A N/A N/A 0.543±0.00 N/A 1.220±0.00 N/A
ENST00000505692 N/A N/A N/A N/A 1.198±0.00 N/A N/A 0.725±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506636 1.268±0.00 0.376±0.00 0.743±0.00 3.099±0.00 N/A N/A N/A 1.944±0.00 0.508±0.25 0.782±0.02 0.581±0.00 1.860±0.21 0.572±0.41 3.814±1.61
ENST00000507814 N/A N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A 1.543±0.00 N/A N/A 0.537±0.00 N/A
ENST00000508536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145386 ENST00000274026 N/A N/A 0.193±0.00 N/A N/A 0.975±0.00 N/A N/A N/A 0.436±0.04 N/A N/A 3.096±0.00 N/A
ENST00000618014 0.647±0.00 1.192±0.00 0.209±0.00 1.094±0.00 1.212±0.31 0.911±0.16 N/A 1.129±0.00 N/A 0.471±0.03 N/A 8.955±5.23 7.354±1.93 5.571±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027714 ENSMUST00000029269 1.576±0.65 N/A 8.347±2.51 12.451±3.39 N/A N/A 1.479±0.46 1.188±0.41 0.964±0.32 2.698±0.00 6.741±0.41 12.447±0.56 12.442±5.08 6.775±2.81
ENSMUST00000131316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.624±0.00
ENSMUST00000133854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136890 2.404±0.00 N/A N/A N/A 6.691±2.27 N/A N/A 2.197±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000138636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149041 5.892±3.18 5.997±0.88 N/A N/A 4.915±0.80 N/A 2.738±0.75 4.014±1.18 3.097±1.23 5.867±1.15 N/A N/A N/A 7.244±0.75
ENSMUST00000155866 1.065±0.00 N/A N/A 9.019±0.00 N/A N/A 1.255±0.15 1.434±0.05 1.349±0.21 N/A N/A 8.926±0.00 9.689±1.85 3.572±0.14
ENSMUST00000156100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027715 ENSMUST00000029270 4.356±3.27 1.495±0.52 3.176±0.18 24.737±6.81 2.252±0.62 10.948±1.26 0.561±0.14 0.882±0.19 77.335±66.76 1.613±0.58 0.728±0.19 11.955±3.78 31.369±25.42 2.625±0.47
ENSMUST00000145309 8.404±2.25 9.333±2.31 N/A N/A 9.905±0.47 30.192±6.46 N/A N/A N/A 2.402±1.12 N/A 29.384±9.47 N/A N/A
ENSMUST00000147380 N/A N/A N/A N/A 1.602±0.42 N/A N/A N/A 39.257±18.26 N/A N/A N/A 26.171±0.00 N/A
ENSMUST00000156575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037325 ENSMUST00000040148 0.219±0.00 0.781±0.29 N/A 1.288±0.00 0.569±0.17 0.817±0.25 0.477±0.11 0.472±0.00 0.532±0.27 0.561±0.10 N/A 0.966±0.47 0.439±0.12 N/A
ENSMUST00000108155 0.278±0.00 0.231±0.00 N/A 0.642±0.00 0.238±0.09 0.209±0.05 0.208±0.00 N/A N/A 1.071±0.07 N/A 0.775±0.00 N/A N/A
ENSMUST00000108156 0.923±0.30 0.424±0.00 2.791±0.23 3.838±1.76 0.759±0.35 N/A 0.249±0.18 1.751±0.44 2.678±1.73 1.086±0.47 2.769±0.21 2.217±1.82 2.168±1.31 12.999±1.56
ENSMUST00000129671 N/A 3.666±1.08 N/A N/A 0.720±0.00 N/A N/A N/A 0.751±0.00 N/A N/A 0.807±0.39 N/A N/A
ENSMUST00000142333 N/A 0.661±0.00 N/A N/A 0.562±0.00 0.570±0.00 N/A N/A 0.933±0.00 1.328±0.00 N/A 0.696±0.22 N/A N/A

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