C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274547 GABRB2-201 ENSG00000145864 9606 - 5:161288429-161548124 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungTestisENST00000274547
Transcript ID Brain Liver Lung Testis
ENST00000274547 2.023±0.00 0.114±0.00 0.439±0.00 0.309±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005237 IEA inhibitory extracellular ligand-gated ion channel activity
GO:0005254 ISS chloride channel activity
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0007214 TAS gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007605 IEA sensory perception of sound
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0043523 IEA regulation of neuron apoptotic process
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0045211 IEA postsynaptic membrane
GO:0048666 IEA neuron development
GO:0051932 ISS synaptic transmission, GABAergic
GO:0055085 TAS transmembrane transport
GO:0060119 IEA inner ear receptor cell development
GO:0060384 IEA innervation
GO:0070062 IDA extracellular vesicular exosome
GO:0071420 ISS cellular response to histamine
GO:0090102 IEA cochlea development
GO:1901215 IEA negative regulation of neuron death
GO:1902476 ISS chloride transmembrane transport
GO:1902711 ISS GABA-A receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007797 Gabrb2-001 protein_coding Mus_musculus 0 1666
ENSMUST00000143626 Gabrb2-002 processed_transcript Mus_musculus 0 785
ENSMUST00000136050 Gabrb2-004 processed_transcript Mus_musculus 0 734
ENSMUST00000140463 Gabrb2-003 processed_transcript Mus_musculus 0 233

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