C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2ba
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274764 HIST1H2BA-001 ENSG00000146047 9606 + 6:25726909-25727292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainTestisENST00000274764
Transcript ID Adipose Bladder Brain Testis
ENST00000274764 0.282±0.00 0.563±0.00 0.607±0.00 11.372±5.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C7 CIL_0001C7_0003 CGP 6:25726132-25727292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 ISS:IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 ISS nucleosome assembly
GO:0006337 ISS nucleosome disassembly
GO:0006954 IEA inflammatory response
GO:0019897 IEA extrinsic component of plasma membrane
GO:0031639 IEA plasminogen activation
GO:0035093 ISS spermatogenesis, exchange of chromosomal proteins
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0051099 IEA positive regulation of binding
GO:0071674 IEA mononuclear cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000152388 zgc:171759-001 protein_coding Danio_rerio 0 298
ENSDART00000103017 zgc:171759-203 protein_coding Danio_rerio 0 291
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 246

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