C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2ba
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146047 HIST1H2BA 9606 + 6:25726909-25727292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274764 HIST1H2BA-001 25726909-25727292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainTestisENST00000274764
Transcript ID Adipose Bladder Brain Testis
ENST00000274764 0.282±0.00 0.563±0.00 0.607±0.00 11.372±5.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C7 CIL_0001C7_0003 CGP 6:25726132-25727292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 ISS:IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 ISS nucleosome assembly
GO:0006337 ISS nucleosome disassembly
GO:0006954 IEA inflammatory response
GO:0019897 IEA extrinsic component of plasma membrane
GO:0031639 IEA plasminogen activation
GO:0035093 ISS spermatogenesis, exchange of chromosomal proteins
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0051099 IEA positive regulation of binding
GO:0071674 IEA mononuclear cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039547 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000070254 si:dkey-261m9.19 si:dkey-261m9.19 protein_coding Danio_rerio
ENSDARG00000070297 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000074491 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000075216 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000075482 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000079909 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000086751 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000087694 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000088259 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000089039 protein_coding Danio_rerio
ENSDARG00000089397 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000089405 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000089719 si:dkey-108k21.11 si:dkey-108k21.11 protein_coding Danio_rerio
ENSDARG00000091066 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000091265 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000091728 zgc:173587 zgc:173587 protein_coding Danio_rerio
ENSDARG00000095115 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSMUSG00000050799 Hist1h2ba histone cluster 1, H2ba protein_coding Mus_musculus

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