C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: post-GPI attachment to proteins 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278243 PGAP2-001 ENSG00000148985 9606 + 11:3808461-3826371 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K0 CIL_0005K0_0001 CGP 11:3665587-3797792
CIL_0005K9 CIL_0005K9_0001 CGP 11:3671083-3826371
CIL_0005KW CIL_0005KW_0001 CGP 11:3797724-3840983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006506 ISS GPI anchor biosynthetic process
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0008565 ISS protein transporter activity
GO:0008630 IEA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0042770 IEA signal transduction in response to DNA damage
GO:0042771 IEA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120119 Pgap2-007 protein_coding Mus_musculus 0 1038
ENSMUST00000033292 Pgap2-003 protein_coding Mus_musculus 0 863
ENSMUST00000119816 Pgap2-024 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000145352 Pgap2-023 nonsense_mediated_decay Mus_musculus 0 832
ENSMUST00000120879 Pgap2-029 protein_coding Mus_musculus 0 785
ENSMUST00000156529 Pgap2-002 protein_coding Mus_musculus 0 785
ENSMUST00000150891 Pgap2-005 processed_transcript Mus_musculus 0 769
ENSMUST00000134621 Pgap2-025 retained_intron Mus_musculus 0 756
ENSMUST00000137303 Pgap2-027 protein_coding Mus_musculus 0 750
ENSMUST00000153020 Pgap2-013 protein_coding Mus_musculus 0 651
ENSMUST00000138479 Pgap2-014 protein_coding Mus_musculus 0 647
ENSMUST00000133311 Pgap2-028 processed_transcript Mus_musculus 0 560
ENSMUST00000129340 Pgap2-006 nonsense_mediated_decay Mus_musculus 0 558
ENSMUST00000140058 Pgap2-022 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000142873 Pgap2-021 protein_coding Mus_musculus 0 244
ENSMUST00000140631 Pgap2-030 protein_coding Mus_musculus 8e-37 159

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