C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 1, (mu/I) large subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000279247 CAPN1-003 ENSG00000014216 9606 + 11:65181872-65212005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279247 13.986±0.00 13.101±0.00 1.748±0.00 6.073±2.37 7.802±3.68 7.336±1.86 4.207±3.19 24.920±0.00 8.374±2.41 14.265±9.36 22.535±0.00 25.136±18.10 17.723±1.20 10.013±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IEA:ISS calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006508 IEA:ISS proteolysis
GO:0008284 TAS positive regulation of cell proliferation
GO:0016020 IDA membrane
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025891 Capn1-201 protein_coding Mus_musculus 0 2446
ENSMUST00000164843 Capn1-202 protein_coding Mus_musculus 0 2298

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