C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 4 homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281321 POU4F2-001 ENSG00000151615 9606 + 4:146638893-146642474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000281321
Transcript ID Testis
ENST00000281321 1.230±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K4 CIL_0007K4_0001 UCNEbase 4:146263660-147044889

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000165 IDA MAPK cascade
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 ISS RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0007409 IEA axonogenesis
GO:0007411 ISS axon guidance
GO:0007605 IEA sensory perception of sound
GO:0030182 ISS neuron differentiation
GO:0030520 IDA intracellular estrogen receptor signaling pathway
GO:0031290 IEA retinal ganglion cell axon guidance
GO:0045597 ISS positive regulation of cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048675 IEA axon extension
GO:0050885 IEA neuromuscular process controlling balance
GO:0060041 ISS retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034115 Pou4f2-001 protein_coding Mus_musculus 0 2979
ENSDART00000124112 pou4f2-001 protein_coding Danio_rerio 0 817
ENSMUST00000053016 Pou4f1-001 protein_coding Mus_musculus 0 494
ENSMUST00000025374 Pou4f3-001 protein_coding Mus_musculus 0 436

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